Portfolio item number 1
Short description of portfolio item number 1
Posts by Collection
portfolio
Portfolio item number 2
Short description of portfolio item number 2
projects
Peliver (Python Deliver!)
Published:
I developed a ligh-weight software to be able to transfer files safely in a local area network (LAN).
NeuroLand
Published:
I developed a mini-software to summarize all I have learnt from a neuroscience course in my BSc as well as practice my programming skills.
PyGic (Python Logic!)
Published:
I developed a ligh-weight logic circuit simulator.
Optical System Design for OCT Project
Published:
I was helping the OCT team at Sharif University of Technology for optical design and optimization for OCT (optical coherence tomography) setup. I also did an embedded design for the data acquisition system (see the post for more images)
Summer Student Program at CERN (ALPHA-G Experiment, Antimatter Factory)
Published:
This was the project I did while being a summer student at CERN in the summer of 2019. My project was simulating and optimizing a critical component used to compress the antimatter beam. The result of this simulation has been used in the Alpha-G project.
Systems Biology for Radiopharmaceutical Treatment
This project was the topic of my master’s thesis for biomedical engineering degree. I used the tools from systems biology and dynamical systems to find optimized treatment plan for radiopharmaceutical therapy.
Branching Annihilating Random Walker Model of Angiogenesis
Published:
This project is the main topic of my master’s degree in mathematics. In this study, I am aiming at understanding the mechanism and the coarse grained properties of the vascular networks by modeling them by networks formed by branching-anhillating random walkers.
Network Optimal Transport
Published:
In this project I aim at understanding the remodeling process(adapting to the changing conditions) of vascular networks. We use the methods of optimal transport to capture this phenomna.
publications
CERN Summer student Program Report
Published in CERN DS, 2019
This document is one of my very first publications. This report was a requirment for summer student program. During my time at CERN, I sumulated a critical piece of component used to trap anti-matter.
ALPHA-G Positron Bunching
Published in CERN DS, 2021
A remote project with CERN to design and optimize the “Positron Bunching” instrument. This critical instrument enables higher efficiency in anti-matter trapping that enables measurements on behaviour of anti-matter under gravity (ALPHA-G experiment).
Free-space Optical Neural Network Based on Optical Nonlinearity and Pooling Operations
Published in IEEE Access, 2021
This is one of my favourite papers. I did an atomic simulation of an optical element to be used as the source of non-linearity in an optical neural network where it acts somehow like an activation function.
Non-linearities in the Transition from Imaging Radiotracers to Therapeutic Radiopharmaceuticals
Published in Journal oof Nuclear Medicine, 2022
Theranostic Digital Twins for Personalized Radiopharmaceutical Therapies: Reimagining Theranostics Via Computational Nuclear Oncology
Published in Front. Oncol., 2022
In this paper, which was supported by my findings in the simulations, we introduced the possibility of the concept of “Digital Twins” for radiopharmaceutical therapy
Using the Cluster Gauss Newton Algorithm to Estimate Theranostic Pharmacokinetic Model Parameters
Published in Journal of Nuclear Medicine, 2023
In Silico Investigation of The Effect of Multi-Bolus Injections in Absorbed Doses to Organs and Tumors in Radiopharmaceutical Therapies
Published in Journal of Nuclear Medicine, 2023
Use of Physiologically Based Radiopharmacokinetic (PBRPK) Models to Simulate Radiopharmaceutical Therapies
Published in UBC Library, 2023
My thesis for masters degree in biomeical engineering
Physiologically Based Radiopharmacokinetic (PBRPK) Modeling to Simulate and Analyze Radiopharmaceutical Therapies: Studies of Non-linearities, Multi-bolus Injections, and Albumin Binding
Published in EJNMMI radiopharm. chem., 2024
In this paper we used the tools from systems biology to investigate possible mechanism that can increase the theraputic index of radiopharmaceutucal therapy
Model-Informed Radiopharmaceutical Therapy Optimization: A Study on the Impact of PBPK Model Parameters on Physical, Biological, and Statistical Measures in 177Lu-PSMA Therapy
Published in Cancers, 2024
Modeling and Simulating Single and Collective Cell Motility
Published in Cold Spring Harbor Perspectives volume on Cell Migration (Accepted), 2024
teaching
Teaching experience 1
Undergraduate course, University 1, Department, 2014
This is a description of a teaching experience. You can use markdown like any other post.
Teaching experience 2
Workshop, University 1, Department, 2015
This is a description of a teaching experience. You can use markdown like any other post.